Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tmed8 ENSMUSG00000034111

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Description

transmembrane p24 trafficking protein 8 [Source:MGI Symbol;Acc:MGI:1923480]

Gene Synonyms

6430595O10Rik, LOC382620, Mem1

Location

Chromosome 12: 87,213,011-87,247,260 reverse strand.

GRCm39:CM001005.3

About this gene

This gene has 7 transcripts (splice variants), 196 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000037418.7	Tmed8-201	7409	326aa	ENSMUSP00000043742.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26072	Q3UHI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000438812.1	Tmed8-205	7499	67aa	ENSMUSP00000217175.1	Nonsense mediated decay		-	-
ENSMUST00000438810.1	Tmed8-203	7485	81aa	ENSMUSP00000217173.1	Nonsense mediated decay		-	-
ENSMUST00000438811.1	Tmed8-204	7407	122aa	ENSMUSP00000217174.1	Nonsense mediated decay		-	-
ENSMUST00000438809.1	Tmed8-202	7310	81aa	ENSMUSP00000217172.1	Nonsense mediated decay		-	-
ENSMUST00000438813.1	Tmed8-206	7291	125aa	ENSMUSP00000217176.1	Nonsense mediated decay		-	-
ENSMUST00000438814.1	Tmed8-207	7225	114aa	ENSMUSP00000217177.1	Nonsense mediated decay		-	-

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Summary

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