Gene: Ube2c ENSMUSG00000001403

Description

ubiquitin-conjugating enzyme E2C [Source:MGI Symbol;Acc:MGI:1915862]

Gene Synonyms

1110015A16Rik, D2Ertd695e

Location

Chromosome 2: 164,611,768-164,620,742 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 9 transcripts (splice variants), 259 orthologues, 25 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000088248.13	Ube2c-202	967	179aa	ENSMUSP00000085581.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17055	A2A4Z0 Q9D1C1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000001439.8	Ube2c-201	2196	171aa	ENSMUSP00000001439.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A4Z1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000566576.1	Ube2c-205	880	150aa	ENSMUSP00000344939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000566575.1	Ube2c-204	1365	91aa	ENSMUSP00000344938.1	Nonsense mediated decay		-	-
ENSMUST00000566580.1	Ube2c-209	1079	51aa	ENSMUSP00000344943.1	Nonsense mediated decay		-	-
ENSMUST00000566574.1	Ube2c-203	1024	75aa	ENSMUSP00000344937.1	Nonsense mediated decay		-	-
ENSMUST00000566579.1	Ube2c-208	928	36aa	ENSMUSP00000344942.1	Nonsense mediated decay		-	-
ENSMUST00000566577.1	Ube2c-206	913	67aa	ENSMUSP00000344940.1	Nonsense mediated decay		-	-
ENSMUST00000566578.1	Ube2c-207	906	84aa	ENSMUSP00000344941.1	Nonsense mediated decay		-	-

Gene: Ube2c ENSMUSG00000001403

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Gene: Ube2c ENSMUSG00000001403

Summary

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