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Human (GRCh38.p14)

Runtime Error in component "EnsEMBL::Web::Component::Variation::Summary [content]"

Function EnsEMBL::Web::Component::Variation::Summary fails to execute due to the following error:


	-------------------- EXCEPTION --------------------
	MSG: ERROR: VCF file
	... /nfs/public/ro/ensweb-data/latest/data_files/www//homo_sapiens/GRCh38/variation_genotype/dbSNP154_ALFA_GRCh
	... 38_20210727.vcf.gz not found

	STACK Bio::EnsEMBL::Variation::VCFCollection::get_all_Samples
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-variation/modules/Bio/EnsEMBL/Variation/VCFCollection.p
	... m:317
	STACK Bio::EnsEMBL::Variation::VCFCollection::get_all_SampleGenotypeFeatures_by_VariationFeature
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-variation/modules/Bio/EnsEMBL/Variation/VCFCollection.p
	... m:659
	STACK Bio::EnsEMBL::Variation::DBSQL::SampleGenotypeAdaptor::fetch_all_by_Variation
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-variation/modules/Bio/EnsEMBL/Variation/DBSQL/SampleGen
	... otypeAdaptor.pm:288
	STACK Bio::EnsEMBL::Variation::Variation::get_all_SampleGenotypes
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-variation/modules/Bio/EnsEMBL/Variation/Variation.pm:89
	... 1
	STACK Bio::EnsEMBL::Variation::DBSQL::BaseAdaptor::_generic_fetch_all_by_Variation_from_Genotypes
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-variation/modules/Bio/EnsEMBL/Variation/DBSQL/BaseAdapt
	... or.pm:389
	STACK Bio::EnsEMBL::Variation::DBSQL::AlleleAdaptor::_fetch_all_by_Variation_from_Genotypes
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-variation/modules/Bio/EnsEMBL/Variation/DBSQL/AlleleAda
	... ptor.pm:321
	STACK Bio::EnsEMBL::Variation::DBSQL::AlleleAdaptor::fetch_all_by_Variation
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-variation/modules/Bio/EnsEMBL/Variation/DBSQL/AlleleAda
	... ptor.pm:292
	STACK Bio::EnsEMBL::Variation::Variation::get_all_Alleles
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-variation/modules/Bio/EnsEMBL/Variation/Variation.pm:80
	... 5
	STACK Bio::EnsEMBL::Variation::VariationFeature::get_all_highest_frequency_minor_Alleles
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-variation/modules/Bio/EnsEMBL/Variation/VariationFeatur
	... e.pm:482
	STACK EnsEMBL::Web::Component::Variation::Summary::alleles
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Component/Variation/Summary
	... .pm:467
	STACK EnsEMBL::Web::Component::Variation::Summary::content
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Component/Variation/Summary
	... .pm:60
	STACK EnsEMBL::Web::Component::get_content
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Component.pm:268
	STACK (eval)
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Document/Panel.pm:435
	STACK EnsEMBL::Web::Document::Panel::component_content
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Document/Panel.pm:432
	STACK EnsEMBL::Web::Document::Panel::content
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Document/Panel.pm:330
	STACK EnsEMBL::Web::Document::Element::Content::content
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Document/Element/Content.pm
	... :142
	STACK EnsEMBL::Web::Controller::render_page
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Controller.pm:468
	STACK EnsEMBL::Web::Controller::Page::render_page
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Controller/Page.pm:81
	STACK EnsEMBL::Web::Controller::Page::init
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Controller/Page.pm:74
	STACK EnsEMBL::Web::Controller::__ANON__
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Controller.pm:112
	STACK (eval) /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Exceptions::try
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Controller::process
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Controller.pm:115
	STACK EnsEMBL::Web::Apache::SpeciesHandler::__ANON__
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Apache/SpeciesHandler.pm:10
	... 3
	STACK (eval) /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Exceptions::try
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Apache::SpeciesHandler::handler
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Apache/SpeciesHandler.pm:10
	... 7
	STACK EnsEMBL::Web::Apache::Handlers::__ANON__
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Apache/Handlers.pm:531
	STACK (eval) /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Exceptions::try
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Apache::Handlers::handler
	... /nfs/public/release/ensweb/live/www/www_116/ensembl-webcode/modules/EnsEMBL/Web/Apache/Handlers.pm:535
	STACK (eval) -e:0
	STACK toplevel -e:0
	Date (localtime)    = Wed Jul 15 14:25:05 2026
	Ensembl API version = 116
	---------------------------------------------------