Transcript: ENST00000654494.4

Description

novel transcript

Location

Chromosome X: 33,726,048-33,942,737 forward strand.

About this transcript

This transcript has 3 exons and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSG00000233928.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000668394.1	-	3562	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662177.1	-	4113	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665499.1	-	3928	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653446.1	-	3127	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665540.1	-	1483	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654494.4	-	1412	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000731650.1	-	1317	No protein	-	lncRNA	-	-
ENST00000656973.1	-	1168	No protein	-	lncRNA	-	-
ENST00000656777.1	-	1109	No protein	-	lncRNA	-	-
ENST00000731656.1	-	1109	No protein	-	lncRNA	-	-
ENST00000731653.1	-	1070	No protein	-	lncRNA	-	-
ENST00000670405.1	-	966	No protein	-	lncRNA	-	-
ENST00000731654.1	-	964	No protein	-	lncRNA	-	-
ENST00000832413.1	-	955	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659014.2	-	936	No protein	-	lncRNA	-	-
ENST00000445233.2	-	933	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000664553.1	-	675	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000832414.1	-	669	No protein	-	lncRNA	-	-
ENST00000670793.1	-	587	No protein	-	lncRNA	-	-
ENST00000439992.6	-	571	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000731649.1	-	549	No protein	-	lncRNA	-	-
ENST00000832415.1	-	519	No protein	-	lncRNA	-	-
ENST00000731652.1	-	507	No protein	-	lncRNA	-	-
ENST00000731651.1	-	496	No protein	-	lncRNA	-	-
ENST00000731657.1	-	480	No protein	-	lncRNA	-	-
ENST00000832416.1	-	461	No protein	-	lncRNA	-	-
ENST00000731659.1	-	416	No protein	-	lncRNA	-	-
ENST00000731655.1	-	404	No protein	-	lncRNA	-	-
ENST00000832417.1	-	302	No protein	-	lncRNA	-	-
ENST00000731658.1	-	228	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,412 bps,

Version

ENST00000654494.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000654494.4

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000654494.4

Summary

About Us

Get help

Our sister sites

Follow us