Transcript: ENST00000506584.5 TMEM161B-DT-207

Description

TMEM161B divergent transcript [Source:HGNC Symbol;Acc:HGNC:43839]

Gene Synonyms

LINC-POLR3G-8, TMEM161B-AS1

Location

Chromosome 5: 88,269,047-88,287,656 forward strand.

About this transcript

This transcript has 7 exons and maps to 93 oligo probes.

Gene

This transcript is a product of gene ENSG00000247828.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000658478.3	TMEM161B-DT-226	3402	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000670451.1	TMEM161B-DT-257	15798	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659938.1	TMEM161B-DT-231	5642	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669353.2	TMEM161B-DT-253	5307	No protein	-	lncRNA	-	-
ENST00000664347.1	TMEM161B-DT-239	4976	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660783.1	TMEM161B-DT-232	4644	No protein	-	lncRNA	-	-
ENST00000653918.1	TMEM161B-DT-216	4280	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658094.1	TMEM161B-DT-225	4044	No protein	-	lncRNA	-	-
ENST00000664546.1	TMEM161B-DT-241	4014	No protein	-	lncRNA	-	-
ENST00000661377.2	TMEM161B-DT-234	3521	No protein	-	lncRNA	-	-
ENST00000659005.4	TMEM161B-DT-228	3473	No protein	-	lncRNA	-	-
ENST00000665319.3	TMEM161B-DT-242	3457	No protein	-	lncRNA	-	-
ENST00000667511.1	TMEM161B-DT-249	3383	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671394.2	TMEM161B-DT-259	3334	No protein	-	lncRNA	-	-
ENST00000670873.1	TMEM161B-DT-258	3281	No protein	-	lncRNA	-	-
ENST00000667127.1	TMEM161B-DT-247	3120	No protein	-	lncRNA	-	-
ENST00000661627.1	TMEM161B-DT-235	2722	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655966.1	TMEM161B-DT-218	2715	No protein	-	lncRNA	-	-
ENST00000659215.1	TMEM161B-DT-230	2639	No protein	-	lncRNA	-	-
ENST00000656903.2	TMEM161B-DT-221	2564	No protein	-	lncRNA	-	-
ENST00000666577.1	TMEM161B-DT-245	2493	No protein	-	lncRNA	-	-
ENST00000667139.1	TMEM161B-DT-248	2398	No protein	-	lncRNA	-	-
ENST00000669465.1	TMEM161B-DT-254	2392	No protein	-	lncRNA	-	-
ENST00000653898.1	TMEM161B-DT-215	2326	No protein	-	lncRNA	-	-
ENST00000658611.1	TMEM161B-DT-227	2228	No protein	-	lncRNA	-	-
ENST00000668471.1	TMEM161B-DT-252	2180	No protein	-	lncRNA	-	-
ENST00000669796.1	TMEM161B-DT-255	2177	No protein	-	lncRNA	-	-
ENST00000504922.8	TMEM161B-DT-206	2023	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000654762.1	TMEM161B-DT-217	2019	No protein	-	lncRNA	-	-
ENST00000787473.1	TMEM161B-DT-315	1784	No protein	-	lncRNA	-	-
ENST00000666808.1	TMEM161B-DT-246	1736	No protein	-	lncRNA	-	-
ENST00000504636.2	TMEM161B-DT-204	1700	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000656195.1	TMEM161B-DT-220	1607	No protein	-	lncRNA	-	-
ENST00000656152.1	TMEM161B-DT-219	1550	No protein	-	lncRNA	-	-
ENST00000668128.1	TMEM161B-DT-251	1549	No protein	-	lncRNA	-	-
ENST00000670030.1	TMEM161B-DT-256	1518	No protein	-	lncRNA	-	-
ENST00000664462.1	TMEM161B-DT-240	1490	No protein	-	lncRNA	-	-
ENST00000665517.1	TMEM161B-DT-243	1464	No protein	-	lncRNA	-	-
ENST00000653183.1	TMEM161B-DT-214	1381	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663490.1	TMEM161B-DT-238	1316	No protein	-	lncRNA	-	-
ENST00000686847.2	TMEM161B-DT-262	1241	No protein	-	lncRNA	-	-
ENST00000657491.1	TMEM161B-DT-222	1240	No protein	-	lncRNA	-	-
ENST00000787438.1	TMEM161B-DT-280	1226	No protein	-	lncRNA	-	-
ENST00000787442.1	TMEM161B-DT-284	1143	No protein	-	lncRNA	-	-
ENST00000787430.1	TMEM161B-DT-272	1135	No protein	-	lncRNA	-	-
ENST00000508015.2	TMEM161B-DT-209	1133	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000501715.6	TMEM161B-DT-202	1101	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000657617.1	TMEM161B-DT-223	1086	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663476.1	TMEM161B-DT-237	1076	No protein	-	lncRNA	-	-
ENST00000787432.1	TMEM161B-DT-274	1072	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657972.4	TMEM161B-DT-224	997	No protein	-	lncRNA	-	-
ENST00000787434.1	TMEM161B-DT-276	946	No protein	-	lncRNA	-	-
ENST00000661351.1	TMEM161B-DT-233	932	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000501869.7	TMEM161B-DT-203	880	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000665926.1	TMEM161B-DT-244	874	No protein	-	lncRNA	-	-
ENST00000787435.1	TMEM161B-DT-277	854	No protein	-	lncRNA	-	-
ENST00000787446.1	TMEM161B-DT-288	846	No protein	-	lncRNA	-	-
ENST00000787443.1	TMEM161B-DT-285	843	No protein	-	lncRNA	-	-
ENST00000787452.1	TMEM161B-DT-294	836	No protein	-	lncRNA	-	-
ENST00000513011.2	TMEM161B-DT-212	833	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000513694.2	TMEM161B-DT-213	824	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000510087.6	TMEM161B-DT-210	810	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000693402.2	TMEM161B-DT-270	783	No protein	-	lncRNA	-	-
ENST00000787460.1	TMEM161B-DT-302	783	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000787462.1	TMEM161B-DT-304	778	No protein	-	lncRNA	-	-
ENST00000659093.1	TMEM161B-DT-229	767	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000787433.1	TMEM161B-DT-275	765	No protein	-	lncRNA	-	-
ENST00000787456.1	TMEM161B-DT-298	759	No protein	-	lncRNA	-	-
ENST00000787447.1	TMEM161B-DT-289	746	No protein	-	lncRNA	-	-
ENST00000787436.1	TMEM161B-DT-278	745	No protein	-	lncRNA	-	-
ENST00000787449.1	TMEM161B-DT-291	738	No protein	-	lncRNA	-	-
ENST00000688118.3	TMEM161B-DT-265	733	No protein	-	lncRNA	-	-
ENST00000688398.2	TMEM161B-DT-266	731	No protein	-	lncRNA	-	-
ENST00000662970.3	TMEM161B-DT-236	723	No protein	-	lncRNA	-	-
ENST00000688523.2	TMEM161B-DT-267	722	No protein	-	lncRNA	-	-
ENST00000787470.1	TMEM161B-DT-312	722	No protein	-	lncRNA	-	-
ENST00000506584.5	TMEM161B-DT-207	717	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000787454.1	TMEM161B-DT-296	711	No protein	-	lncRNA	-	-
ENST00000787455.1	TMEM161B-DT-297	711	No protein	-	lncRNA	-	-
ENST00000787467.1	TMEM161B-DT-309	700	No protein	-	lncRNA	-	-
ENST00000787463.1	TMEM161B-DT-305	698	No protein	-	lncRNA	-	-
ENST00000787468.1	TMEM161B-DT-310	690	No protein	-	lncRNA	-	-
ENST00000787448.1	TMEM161B-DT-290	687	No protein	-	lncRNA	-	-
ENST00000689901.3	TMEM161B-DT-268	664	No protein	-	lncRNA	-	-
ENST00000787444.1	TMEM161B-DT-286	662	No protein	-	lncRNA	-	-
ENST00000787450.1	TMEM161B-DT-292	656	No protein	-	lncRNA	-	-
ENST00000787458.1	TMEM161B-DT-300	652	No protein	-	lncRNA	-	-
ENST00000507736.2	TMEM161B-DT-208	645	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000787471.1	TMEM161B-DT-313	644	No protein	-	lncRNA	-	-
ENST00000787439.1	TMEM161B-DT-281	643	No protein	-	lncRNA	-	-
ENST00000688087.1	TMEM161B-DT-264	636	No protein	-	lncRNA	-	-
ENST00000787437.1	TMEM161B-DT-279	636	No protein	-	lncRNA	-	-
ENST00000787431.1	TMEM161B-DT-273	634	No protein	-	lncRNA	-	-
ENST00000685962.1	TMEM161B-DT-261	626	No protein	-	lncRNA	-	-
ENST00000686930.3	TMEM161B-DT-263	623	No protein	-	lncRNA	-	-
ENST00000668037.3	TMEM161B-DT-250	604	No protein	-	lncRNA	-	-
ENST00000787474.1	TMEM161B-DT-316	602	No protein	-	lncRNA	-	-
ENST00000787441.1	TMEM161B-DT-283	595	No protein	-	lncRNA	-	-
ENST00000702628.2	TMEM161B-DT-271	592	No protein	-	lncRNA	-	-
ENST00000512724.5	TMEM161B-DT-211	570	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000787451.1	TMEM161B-DT-293	562	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000787461.1	TMEM161B-DT-303	551	No protein	-	lncRNA	-	-
ENST00000504769.5	TMEM161B-DT-205	548	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000787466.1	TMEM161B-DT-308	547	No protein	-	lncRNA	-	-
ENST00000684909.2	TMEM161B-DT-260	513	No protein	-	lncRNA	-	-
ENST00000787440.1	TMEM161B-DT-282	506	No protein	-	lncRNA	-	-
ENST00000787445.1	TMEM161B-DT-287	492	No protein	-	lncRNA	-	-
ENST00000787459.1	TMEM161B-DT-301	490	No protein	-	lncRNA	-	-
ENST00000787464.1	TMEM161B-DT-306	486	No protein	-	lncRNA	-	-
ENST00000787469.1	TMEM161B-DT-311	472	No protein	-	lncRNA	-	-
ENST00000787453.1	TMEM161B-DT-295	462	No protein	-	lncRNA	-	-
ENST00000692797.2	TMEM161B-DT-269	447	No protein	-	lncRNA	-	-
ENST00000787465.1	TMEM161B-DT-307	434	No protein	-	lncRNA	-	-
ENST00000496733.6	TMEM161B-DT-201	409	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000787472.1	TMEM161B-DT-314	360	No protein	-	lncRNA	-	-
ENST00000787457.1	TMEM161B-DT-299	332	No protein	-	lncRNA	-	-
ENST00000787475.1	TMEM161B-DT-317	209	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 717 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000506584.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000506584.5 TMEM161B-DT-207

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Transcript: ENST00000506584.5 TMEM161B-DT-207

Summary

About Us

Get help

Our sister sites

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